omero.util.OmeroPopo module¶

class util.OmeroPopo.DataObject[source]¶

Bases: object

asIObject()[source]¶

getDetails()[source]¶

getDirty()[source]¶

getId()[source]¶

isLoaded()[source]¶

setDirty(boolean)[source]¶

setId(id)[source]¶

setValue(value)[source]¶

class util.OmeroPopo.EllipseData(shape=None)[source]¶

Bases: ShapeData

containsPoints()[source]¶

getRadiusX()[source]¶

getRadiusY()[source]¶

getX()[source]¶

getY()[source]¶

setRadiusX(radiusx)[source]¶

setRadiusY(radiusy)[source]¶

setX(x)[source]¶

setY(y)[source]¶

transformPoint(transform, point)[source]¶

class util.OmeroPopo.ImageData(image=None)[source]¶

Bases: DataObject

getDescription()[source]¶

getName()[source]¶

setDescription(description)[source]¶

setName(name)[source]¶

class util.OmeroPopo.MaskData(maskShape=None)[source]¶

Bases: ShapeData

getHeight()[source]¶

getMask()[source]¶

getWidth()[source]¶

getX()[source]¶

getY()[source]¶

setHeight(height)[source]¶

setMask(mask)[source]¶

setWidth(width)[source]¶

setX(x)[source]¶

setY(y)[source]¶

class util.OmeroPopo.PolygonData(shape=None)[source]¶

Bases: ShapeData

Angle2D(x1, y1, x2, y2)[source]¶

containsPoints()[source]¶

fromPoints(type)[source]¶

getBoundingRectangle()[source]¶

getContents(string, start, end)[source]¶

getMaskPoints()[source]¶

getPoints()[source]¶

getPoints1()[source]¶

getPoints2()[source]¶

getPointsString()[source]¶

inPolygon(p)[source]¶

parsePointsToList(pts)[source]¶

parseShapeStringToPoints()[source]¶

setPointsFromList(points, points1, point2, mask)[source]¶

setPointsString(pts)[source]¶

toCoords(ptsList)[source]¶

toString(pointsList)[source]¶

class util.OmeroPopo.ROICoordinate(z=0, t=0)[source]¶

Bases: object

getTimepoint()[source]¶

getZSection()[source]¶

setTimepoint(t)[source]¶

setZSection(z)[source]¶

class util.OmeroPopo.ROIData(roi=None)[source]¶

Bases: DataObject

addShapeData(shape)[source]¶

getImage()[source]¶

getIterator()[source]¶

getPlaneCount()[source]¶

getShapeCount()[source]¶

getShapes(z, t)[source]¶

getShapesInRange(start, end)[source]¶

initialise()[source]¶

removeShapeData(shape)[source]¶

setImage(image)[source]¶

class util.OmeroPopo.RectData(rectShape=None)[source]¶

Bases: ShapeData

containsPoints()[source]¶

getHeight()[source]¶

getWidth()[source]¶

getX()[source]¶

getY()[source]¶

setHeight(height)[source]¶

setWidth(width)[source]¶

setX(x)[source]¶

setY(y)[source]¶

transformPoint(transform, point)[source]¶

class util.OmeroPopo.ShapeData[source]¶

Bases: DataObject

contains(point)[source]¶

containsPoints()[source]¶

getROICoordinate()[source]¶

getT()[source]¶

getText()[source]¶

getTransform()[source]¶

getZ()[source]¶

setROICoordinate(coord)[source]¶

setT(theT)[source]¶

setText(text)[source]¶

setTransform(transform)[source]¶

setZ(theZ)[source]¶

transformToMatrix(str)[source]¶

class util.OmeroPopo.WorkflowData(workflow=None)[source]¶

Bases: DataObject

addKeyword(keyword)[source]¶

containsKeyword(keyword)[source]¶

getKeywords()[source]¶

getNamespace()[source]¶

removeKeyword(keyword)[source]¶

setKeywords(keywords)[source]¶

setKeywordsFromString(keywords)[source]¶

setNamespace(namespace)[source]¶

util.OmeroPopo.shapeWrapper(serverSideShape)[source]¶: Wrap the serverSide shape as the appropriate OmeroPopos @param serverSideShape The shape object to wrap. @return See above.

util.OmeroPopo.toCSV(list)[source]¶: Convert a list to a Comma Separated Value string. @param list The list to convert. @return See above.

util.OmeroPopo.toList(csvString)[source]¶: Convert a csv string to a list of strings @param csvString The CSV string to convert. @return See above.